Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab43Q8CG50 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Gm6659-201ENSMUST00000174752 547 ntBASIC17.36■□□□□ 0.37
Rab43Q8CG50 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.36■□□□□ 0.37
Rab43Q8CG50 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Rab43Q8CG50 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab43Q8CG50 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab43Q8CG50 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab43Q8CG50 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Gm38027-201ENSMUST00000192315 235 ntBASIC17.34■□□□□ 0.37
Rab43Q8CG50 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.34■□□□□ 0.37
Rab43Q8CG50 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab43Q8CG50 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab43Q8CG50 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab43Q8CG50 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.33■□□□□ 0.37
Rab43Q8CG50 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.33■□□□□ 0.37
Rab43Q8CG50 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab43Q8CG50 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab43Q8CG50 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Gm4974-201ENSMUST00000209974 875 ntBASIC17.32■□□□□ 0.36
Rab43Q8CG50 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab43Q8CG50 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rab43Q8CG50 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab43Q8CG50 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms