Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28bQ8CEG5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28bQ8CEG5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28bQ8CEG5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Gm21956-201ENSMUST00000179946 522 ntBASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28bQ8CEG5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28bQ8CEG5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Gm13241-201ENSMUST00000094493 780 ntBASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc28bQ8CEG5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc28bQ8CEG5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Gm26833-201ENSMUST00000180899 440 ntBASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms