Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc38Q8CDN8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.77■□□□□ 0.75
Ccdc38Q8CDN8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc38Q8CDN8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc38Q8CDN8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc38Q8CDN8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc38Q8CDN8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc38Q8CDN8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc38Q8CDN8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc38Q8CDN8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc38Q8CDN8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms