Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.23■□□□□ 0.35
SynpoQ8CC35 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynpoQ8CC35 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.22■□□□□ 0.35
SynpoQ8CC35 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.22■□□□□ 0.35
SynpoQ8CC35 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SynpoQ8CC35 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Gm44549-201ENSMUST00000208351 577 ntBASIC17.21■□□□□ 0.35
SynpoQ8CC35 Gm10252-201ENSMUST00000209541 832 ntBASIC17.21■□□□□ 0.35
SynpoQ8CC35 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynpoQ8CC35 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynpoQ8CC35 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.19■□□□□ 0.34
SynpoQ8CC35 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.18■□□□□ 0.34
SynpoQ8CC35 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.18■□□□□ 0.34
SynpoQ8CC35 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.18■□□□□ 0.34
SynpoQ8CC35 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.18■□□□□ 0.34
SynpoQ8CC35 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynpoQ8CC35 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
SynpoQ8CC35 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Dio3-201ENSMUST00000097228 1449 ntBASIC17.17■□□□□ 0.34
SynpoQ8CC35 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynpoQ8CC35 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynpoQ8CC35 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SynpoQ8CC35 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms