Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a2Q8CA03 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a2Q8CA03 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a2Q8CA03 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc46a2Q8CA03 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a2Q8CA03 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms