Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Gm10138-203ENSMUST00000206952 366 ntBASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp43Q8BUM9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp43Q8BUM9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp43Q8BUM9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp43Q8BUM9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp43Q8BUM9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Mir6349-201ENSMUST00000184059 97 ntBASIC18■□□□□ 0.47
Usp43Q8BUM9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18■□□□□ 0.47
Usp43Q8BUM9 Gm8969-201ENSMUST00000199694 526 ntBASIC18■□□□□ 0.47
Usp43Q8BUM9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Usp43Q8BUM9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp43Q8BUM9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms