Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Gm7889-201ENSMUST00000185591 958 ntBASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scfd1Q8BRF7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Scfd1Q8BRF7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Scfd1Q8BRF7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Gm27463-201ENSMUST00000183569 57 ntBASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scfd1Q8BRF7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scfd1Q8BRF7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scfd1Q8BRF7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.35■□□□□ 0.85
Scfd1Q8BRF7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Scfd1Q8BRF7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms