Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpsf4Q8BQZ5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cpsf4Q8BQZ5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Rab3c-203ENSMUST00000224180 967 ntBASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpsf4Q8BQZ5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Gm10653-202ENSMUST00000139570 835 ntBASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpsf4Q8BQZ5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cpsf4Q8BQZ5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpsf4Q8BQZ5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpsf4Q8BQZ5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4Q8BQZ5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms