Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ckap4Q8BMK4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.86■□□□□ 0.29
Ckap4Q8BMK4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Gm8969-201ENSMUST00000199694 526 ntBASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ckap4Q8BMK4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap4Q8BMK4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap4Q8BMK4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap4Q8BMK4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ckap4Q8BMK4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms