Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Clrn3Q8BHH8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clrn3Q8BHH8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn3Q8BHH8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Gm2399-201ENSMUST00000104944 225 ntBASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn3Q8BHH8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms