Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim50Q810I2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim50Q810I2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim50Q810I2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Trim50Q810I2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim50Q810I2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim50Q810I2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim50Q810I2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim50Q810I2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.37■□□□□ 0.37
Trim50Q810I2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim50Q810I2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim50Q810I2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim50Q810I2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim50Q810I2 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.36■□□□□ 0.37
Trim50Q810I2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim50Q810I2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim50Q810I2 Dio3-201ENSMUST00000097228 1449 ntBASIC17.36■□□□□ 0.37
Trim50Q810I2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim50Q810I2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.35■□□□□ 0.37
Trim50Q810I2 Gm11927-201ENSMUST00000118472 759 ntBASIC17.35■□□□□ 0.37
Trim50Q810I2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim50Q810I2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim50Q810I2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim50Q810I2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim50Q810I2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim50Q810I2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim50Q810I2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim50Q810I2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim50Q810I2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim50Q810I2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim50Q810I2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim50Q810I2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim50Q810I2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim50Q810I2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trim50Q810I2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.33■□□□□ 0.36
Trim50Q810I2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms