Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Gm9731-201ENSMUST00000209480 747 ntBASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.17■□□□□ 0.82
Trnp1Q80ZI1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trnp1Q80ZI1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 Gm37025-201ENSMUST00000195159 829 ntBASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trnp1Q80ZI1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trnp1Q80ZI1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trnp1Q80ZI1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trnp1Q80ZI1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Gm18115-201ENSMUST00000221209 621 ntBASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trnp1Q80ZI1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Gm26039-201ENSMUST00000158152 144 ntBASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Gm27742-201ENSMUST00000184667 60 ntBASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trnp1Q80ZI1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trnp1Q80ZI1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Gm24589-201ENSMUST00000116692 94 ntBASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trnp1Q80ZI1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms