Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nrde2Q80XC6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nrde2Q80XC6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nrde2Q80XC6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nrde2Q80XC6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Odf3b-204ENSMUST00000227834 930 ntBASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nrde2Q80XC6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Gm7367-201ENSMUST00000057611 492 ntBASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.03■□□□□ 0.48
Nrde2Q80XC6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Gm11539-201ENSMUST00000119837 557 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Gm13436-201ENSMUST00000120418 567 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Gm13559-201ENSMUST00000120476 863 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nrde2Q80XC6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nrde2Q80XC6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Nrde2Q80XC6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nrde2Q80XC6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms