Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ShprhQ7TPQ3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
ShprhQ7TPQ3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Gm27704-201ENSMUST00000185094 107 ntBASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShprhQ7TPQ3 Notumos-201ENSMUST00000151998 2659 ntBASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ShprhQ7TPQ3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC25.39■■□□□ 1.66
ShprhQ7TPQ3 Gm27389-201ENSMUST00000183622 195 ntBASIC25.39■■□□□ 1.66
ShprhQ7TPQ3 Gm17807-201ENSMUST00000186869 298 ntBASIC25.39■■□□□ 1.66
ShprhQ7TPQ3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ShprhQ7TPQ3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ShprhQ7TPQ3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Gm18958-201ENSMUST00000174258 762 ntBASIC25.39■■□□□ 1.65
ShprhQ7TPQ3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 Gm27357-201ENSMUST00000183754 135 ntBASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ShprhQ7TPQ3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ShprhQ7TPQ3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Gm37374-201ENSMUST00000194954 1829 ntBASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ShprhQ7TPQ3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Gm11950-201ENSMUST00000121615 838 ntBASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ShprhQ7TPQ3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Gm11860-201ENSMUST00000122346 1010 ntBASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Gm18669-201ENSMUST00000216049 778 ntBASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 AC120002.2-201ENSMUST00000220205 773 ntBASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC25.34■■□□□ 1.65
ShprhQ7TPQ3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms