Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx55Q6ZPL9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx55Q6ZPL9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Gm28033-201ENSMUST00000184224 96 ntBASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx55Q6ZPL9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx55Q6ZPL9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx55Q6ZPL9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx55Q6ZPL9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx55Q6ZPL9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx55Q6ZPL9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx55Q6ZPL9 Gm17807-201ENSMUST00000186869 298 ntBASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Gm17808-201ENSMUST00000200859 894 ntBASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Il3ra-202ENSMUST00000223589 738 ntBASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx55Q6ZPL9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Gm7213-201ENSMUST00000215977 950 ntBASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 BC021767-201ENSMUST00000126387 1716 ntBASIC20.29■□□□□ 0.84
Ddx55Q6ZPL9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Gm9731-201ENSMUST00000209480 747 ntBASIC20.28■□□□□ 0.84
Ddx55Q6ZPL9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms