Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scaf4Q6PFF0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scaf4Q6PFF0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scaf4Q6PFF0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scaf4Q6PFF0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scaf4Q6PFF0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scaf4Q6PFF0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf4Q6PFF0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms