Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nup98Q6PFD9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.12■□□□□ 0.97
Nup98Q6PFD9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm2274-201ENSMUST00000184539 609 ntBASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm18101-201ENSMUST00000215769 548 ntBASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Gm10819-201ENSMUST00000099988 561 ntBASIC21.11■□□□□ 0.97
Nup98Q6PFD9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Mir8112-201ENSMUST00000184382 131 ntBASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nup98Q6PFD9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.09■□□□□ 0.97
Nup98Q6PFD9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup98Q6PFD9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.08■□□□□ 0.97
Nup98Q6PFD9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup98Q6PFD9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup98Q6PFD9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nup98Q6PFD9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Nup98Q6PFD9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Nup98Q6PFD9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.08■□□□□ 0.96
Nup98Q6PFD9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.08■□□□□ 0.96
Nup98Q6PFD9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nup98Q6PFD9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Gm7367-201ENSMUST00000057611 492 ntBASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nup98Q6PFD9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.06■□□□□ 0.96
Nup98Q6PFD9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Fst-202ENSMUST00000223640 2612 ntBASIC21.06■□□□□ 0.96
Nup98Q6PFD9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Gm17661-201ENSMUST00000170317 270 ntBASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nup98Q6PFD9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nup98Q6PFD9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms