Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abcf1Q6P542 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.94■□□□□ 0.78
Abcf1Q6P542 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcf1Q6P542 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.93■□□□□ 0.78
Abcf1Q6P542 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcf1Q6P542 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Gm10602-201ENSMUST00000098239 609 ntBASIC19.92■□□□□ 0.78
Abcf1Q6P542 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.92■□□□□ 0.78
Abcf1Q6P542 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Gm29257-201ENSMUST00000186115 639 ntBASIC19.91■□□□□ 0.78
Abcf1Q6P542 Gm6420-201ENSMUST00000193885 723 ntBASIC19.91■□□□□ 0.78
Abcf1Q6P542 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.91■□□□□ 0.78
Abcf1Q6P542 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcf1Q6P542 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Gm12933-201ENSMUST00000120203 872 ntBASIC19.9■□□□□ 0.78
Abcf1Q6P542 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.9■□□□□ 0.78
Abcf1Q6P542 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcf1Q6P542 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Abcf1Q6P542 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Abcf1Q6P542 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Abcf1Q6P542 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Abcf1Q6P542 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Abcf1Q6P542 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Abcf1Q6P542 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms