Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.68■□□□□ 0.58
Scube3Q66PY1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scube3Q66PY1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.67■□□□□ 0.58
Scube3Q66PY1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.67■□□□□ 0.58
Scube3Q66PY1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scube3Q66PY1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.66■□□□□ 0.58
Scube3Q66PY1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.66■□□□□ 0.58
Scube3Q66PY1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scube3Q66PY1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube3Q66PY1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Scube3Q66PY1 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.65■□□□□ 0.58
Scube3Q66PY1 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.65■□□□□ 0.58
Scube3Q66PY1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scube3Q66PY1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Mir7071-201ENSMUST00000184847 69 ntBASIC18.64■□□□□ 0.57
Scube3Q66PY1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.64■□□□□ 0.57
Scube3Q66PY1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube3Q66PY1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.63■□□□□ 0.57
Scube3Q66PY1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube3Q66PY1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scube3Q66PY1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms