Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Gm2213-201ENSMUST00000197485 688 ntBASIC14.89□□□□□ -0.03
Col7a1Q63870 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.89□□□□□ -0.03
Col7a1Q63870 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.89□□□□□ -0.03
Col7a1Q63870 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Psmb5-202ENSMUST00000227257 622 ntBASIC14.89□□□□□ -0.03
Col7a1Q63870 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Gm37722-201ENSMUST00000193757 208 ntBASIC14.89□□□□□ -0.03
Col7a1Q63870 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col7a1Q63870 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col7a1Q63870 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.88□□□□□ -0.03
Col7a1Q63870 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col7a1Q63870 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.88□□□□□ -0.03
Col7a1Q63870 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col7a1Q63870 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.87□□□□□ -0.03
Col7a1Q63870 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.87□□□□□ -0.03
Col7a1Q63870 Gm14822-201ENSMUST00000122247 291 ntBASIC14.87□□□□□ -0.03
Col7a1Q63870 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Gm25911-201ENSMUST00000157621 56 ntBASIC14.87□□□□□ -0.03
Col7a1Q63870 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col7a1Q63870 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col7a1Q63870 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col7a1Q63870 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col7a1Q63870 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col7a1Q63870 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col7a1Q63870 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.86□□□□□ -0.03
Col7a1Q63870 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.86□□□□□ -0.03
Col7a1Q63870 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col7a1Q63870 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Gm7862-201ENSMUST00000121461 292 ntBASIC14.86□□□□□ -0.03
Col7a1Q63870 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.86□□□□□ -0.03
Col7a1Q63870 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Gm15467-201ENSMUST00000120582 445 ntBASIC14.85□□□□□ -0.03
Col7a1Q63870 Gm24513-201ENSMUST00000174964 138 ntBASIC14.85□□□□□ -0.03
Col7a1Q63870 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col7a1Q63870 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms