Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ecm1Q61508 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ecm1Q61508 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ecm1Q61508 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ecm1Q61508 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ecm1Q61508 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.8■□□□□ 0.76
Ecm1Q61508 Gm29791-202ENSMUST00000207888 369 ntBASIC19.8■□□□□ 0.76
Ecm1Q61508 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ecm1Q61508 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ecm1Q61508 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Ecm1Q61508 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ecm1Q61508 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ecm1Q61508 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ecm1Q61508 Gm27741-201ENSMUST00000185060 237 ntBASIC19.79■□□□□ 0.76
Ecm1Q61508 Gm7370-201ENSMUST00000219471 767 ntBASIC19.79■□□□□ 0.76
Ecm1Q61508 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ecm1Q61508 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ecm1Q61508 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Gm14859-201ENSMUST00000117752 357 ntBASIC19.78■□□□□ 0.76
Ecm1Q61508 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Ank2-226ENSMUST00000189368 339 ntBASIC19.78■□□□□ 0.76
Ecm1Q61508 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.78■□□□□ 0.76
Ecm1Q61508 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ecm1Q61508 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Ecm1Q61508 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ecm1Q61508 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ecm1Q61508 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.77■□□□□ 0.76
Ecm1Q61508 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.77■□□□□ 0.76
Ecm1Q61508 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.77■□□□□ 0.76
Ecm1Q61508 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ecm1Q61508 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Ecm1Q61508 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ecm1Q61508 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ecm1Q61508 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ecm1Q61508 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.76■□□□□ 0.75
Ecm1Q61508 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.76■□□□□ 0.75
Ecm1Q61508 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ecm1Q61508 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ecm1Q61508 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ecm1Q61508 Gm9103-201ENSMUST00000119371 405 ntBASIC19.75■□□□□ 0.75
Ecm1Q61508 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Gm17661-201ENSMUST00000170317 270 ntBASIC19.75■□□□□ 0.75
Ecm1Q61508 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.75■□□□□ 0.75
Ecm1Q61508 Gm21559-201ENSMUST00000220638 855 ntBASIC19.75■□□□□ 0.75
Ecm1Q61508 Gm8587-201ENSMUST00000076538 843 ntBASIC19.75■□□□□ 0.75
Ecm1Q61508 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ecm1Q61508 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.74■□□□□ 0.75
Ecm1Q61508 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ecm1Q61508 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ecm1Q61508 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ecm1Q61508 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ecm1Q61508 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Ecm1Q61508 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.73■□□□□ 0.75
Ecm1Q61508 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.73■□□□□ 0.75
Ecm1Q61508 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms