Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Gm11643-201ENSMUST00000119578 864 ntBASIC18.26■□□□□ 0.51
Slc6a4Q60857 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Gm21814-202ENSMUST00000203277 873 ntBASIC18.26■□□□□ 0.51
Slc6a4Q60857 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a4Q60857 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.25■□□□□ 0.51
Slc6a4Q60857 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.25■□□□□ 0.51
Slc6a4Q60857 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.25■□□□□ 0.51
Slc6a4Q60857 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a4Q60857 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.24■□□□□ 0.51
Slc6a4Q60857 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Gm10517-202ENSMUST00000192970 758 ntBASIC18.24■□□□□ 0.51
Slc6a4Q60857 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a4Q60857 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Gm13401-201ENSMUST00000117074 291 ntBASIC18.23■□□□□ 0.51
Slc6a4Q60857 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a4Q60857 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Slc6a4Q60857 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.22■□□□□ 0.51
Slc6a4Q60857 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.22■□□□□ 0.51
Slc6a4Q60857 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a4Q60857 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.21■□□□□ 0.51
Slc6a4Q60857 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Timm23-208ENSMUST00000226683 750 ntBASIC18.21■□□□□ 0.51
Slc6a4Q60857 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc6a4Q60857 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slc6a4Q60857 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Gm3375-201ENSMUST00000203929 796 ntBASIC18.2■□□□□ 0.5
Slc6a4Q60857 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms