Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.08■□□□□ 0.32
ClpbQ60649 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.08■□□□□ 0.32
ClpbQ60649 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ClpbQ60649 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClpbQ60649 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ClpbQ60649 Tgds-204ENSMUST00000228543 1594 ntBASIC17.07■□□□□ 0.32
ClpbQ60649 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Gm13168-201ENSMUST00000121771 632 ntBASIC17.07■□□□□ 0.32
ClpbQ60649 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ClpbQ60649 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ClpbQ60649 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClpbQ60649 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClpbQ60649 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
ClpbQ60649 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.06■□□□□ 0.32
ClpbQ60649 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Gm22240-201ENSMUST00000175225 82 ntBASIC17.06■□□□□ 0.32
ClpbQ60649 Gm27275-201ENSMUST00000184318 272 ntBASIC17.06■□□□□ 0.32
ClpbQ60649 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ClpbQ60649 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClpbQ60649 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.05■□□□□ 0.32
ClpbQ60649 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Gm2399-201ENSMUST00000104944 225 ntBASIC17.05■□□□□ 0.32
ClpbQ60649 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
ClpbQ60649 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.05■□□□□ 0.32
ClpbQ60649 Gm22325-201ENSMUST00000158904 308 ntBASIC17.05■□□□□ 0.32
ClpbQ60649 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.05■□□□□ 0.32
ClpbQ60649 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClpbQ60649 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
ClpbQ60649 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.04■□□□□ 0.32
ClpbQ60649 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClpbQ60649 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ClpbQ60649 Dio3-201ENSMUST00000097228 1449 ntBASIC17.04■□□□□ 0.32
ClpbQ60649 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ClpbQ60649 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.03■□□□□ 0.32
ClpbQ60649 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.03■□□□□ 0.32
ClpbQ60649 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ClpbQ60649 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ClpbQ60649 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.03■□□□□ 0.32
ClpbQ60649 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.03■□□□□ 0.32
ClpbQ60649 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClpbQ60649 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms