Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.8■□□□□ 0.92
Prdm1Q60636 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Prdm1Q60636 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.8■□□□□ 0.92
Prdm1Q60636 Gm18025-201ENSMUST00000221733 862 ntBASIC20.8■□□□□ 0.92
Prdm1Q60636 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Prdm1Q60636 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prdm1Q60636 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.8■□□□□ 0.92
Prdm1Q60636 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prdm1Q60636 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.79■□□□□ 0.92
Prdm1Q60636 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Prdm1Q60636 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm1Q60636 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prdm1Q60636 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prdm1Q60636 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.78■□□□□ 0.92
Prdm1Q60636 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Prdm1Q60636 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm1Q60636 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Prdm1Q60636 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm1Q60636 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Mir6349-201ENSMUST00000184059 97 ntBASIC20.76■□□□□ 0.91
Prdm1Q60636 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.76■□□□□ 0.91
Prdm1Q60636 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.76■□□□□ 0.91
Prdm1Q60636 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm1Q60636 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Idnk-204ENSMUST00000226010 1898 ntBASIC20.75■□□□□ 0.91
Prdm1Q60636 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.75■□□□□ 0.91
Prdm1Q60636 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.75■□□□□ 0.91
Prdm1Q60636 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.75■□□□□ 0.91
Prdm1Q60636 Gm15378-201ENSMUST00000121894 207 ntBASIC20.75■□□□□ 0.91
Prdm1Q60636 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.75■□□□□ 0.91
Prdm1Q60636 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Prdm1Q60636 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.75■□□□□ 0.91
Prdm1Q60636 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm1Q60636 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Prdm1Q60636 Gm37292-201ENSMUST00000192062 758 ntBASIC20.74■□□□□ 0.91
Prdm1Q60636 Gm43183-201ENSMUST00000200632 547 ntBASIC20.74■□□□□ 0.91
Prdm1Q60636 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.74■□□□□ 0.91
Prdm1Q60636 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm1Q60636 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms