Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Mir7075-201ENSMUST00000184187 82 ntBASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms