Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.17■□□□□ 0.34
Defb28Q3V2L0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Defb28Q3V2L0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Defb28Q3V2L0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Defb28Q3V2L0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.15■□□□□ 0.34
Defb28Q3V2L0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Defb28Q3V2L0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Gm18115-201ENSMUST00000221209 621 ntBASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Defb28Q3V2L0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Defb28Q3V2L0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Gm27742-201ENSMUST00000184667 60 ntBASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Defb28Q3V2L0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Defb28Q3V2L0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms