Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.09■□□□□ 0.49
Naf1Q3UMQ8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Naf1Q3UMQ8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.08■□□□□ 0.48
Naf1Q3UMQ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.07■□□□□ 0.48
Naf1Q3UMQ8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.06■□□□□ 0.48
Naf1Q3UMQ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Naf1Q3UMQ8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Naf1Q3UMQ8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Gm13836-201ENSMUST00000121159 501 ntBASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Naf1Q3UMQ8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms