Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cul4aQ3TCH7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cul4aQ3TCH7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cul4aQ3TCH7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cul4aQ3TCH7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cul4aQ3TCH7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cul4aQ3TCH7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cul4aQ3TCH7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
Cul4aQ3TCH7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms