Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Mir2861-201ENSMUST00000175539 82 ntBASIC19.01■□□□□ 0.63
Trim72Q1XH17 Mir6349-201ENSMUST00000184059 97 ntBASIC19.01■□□□□ 0.63
Trim72Q1XH17 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Mtag2-201ENSMUST00000058665 714 ntBASIC19.01■□□□□ 0.63
Trim72Q1XH17 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim72Q1XH17 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19■□□□□ 0.63
Trim72Q1XH17 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Trim72Q1XH17 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19■□□□□ 0.63
Trim72Q1XH17 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19■□□□□ 0.63
Trim72Q1XH17 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim72Q1XH17 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Idnk-204ENSMUST00000226010 1898 ntBASIC18.99■□□□□ 0.63
Trim72Q1XH17 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Gm8969-201ENSMUST00000199694 526 ntBASIC18.99■□□□□ 0.63
Trim72Q1XH17 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.99■□□□□ 0.63
Trim72Q1XH17 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Trim72Q1XH17 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim72Q1XH17 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Gm13158-201ENSMUST00000122007 736 ntBASIC18.97■□□□□ 0.63
Trim72Q1XH17 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.97■□□□□ 0.63
Trim72Q1XH17 Gm29791-202ENSMUST00000207888 369 ntBASIC18.97■□□□□ 0.63
Trim72Q1XH17 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.97■□□□□ 0.63
Trim72Q1XH17 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim72Q1XH17 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Gm27275-201ENSMUST00000184318 272 ntBASIC18.96■□□□□ 0.63
Trim72Q1XH17 Gm29257-201ENSMUST00000186115 639 ntBASIC18.96■□□□□ 0.63
Trim72Q1XH17 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim72Q1XH17 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim72Q1XH17 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim72Q1XH17 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim72Q1XH17 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim72Q1XH17 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim72Q1XH17 Gm15375-201ENSMUST00000119510 849 ntBASIC18.95■□□□□ 0.62
Trim72Q1XH17 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.95■□□□□ 0.62
Trim72Q1XH17 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim72Q1XH17 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms