Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.48■□□□□ 0.39
Sox4Q06831 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox4Q06831 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sox4Q06831 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox4Q06831 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.48■□□□□ 0.39
Sox4Q06831 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox4Q06831 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Gm37292-201ENSMUST00000192062 758 ntBASIC17.47■□□□□ 0.39
Sox4Q06831 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.47■□□□□ 0.39
Sox4Q06831 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.47■□□□□ 0.39
Sox4Q06831 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox4Q06831 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sox4Q06831 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sox4Q06831 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox4Q06831 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
Sox4Q06831 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Sox4Q06831 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox4Q06831 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.46■□□□□ 0.39
Sox4Q06831 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Sox4Q06831 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.46■□□□□ 0.39
Sox4Q06831 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sox4Q06831 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.46■□□□□ 0.39
Sox4Q06831 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.46■□□□□ 0.39
Sox4Q06831 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox4Q06831 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sox4Q06831 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox4Q06831 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.45■□□□□ 0.38
Sox4Q06831 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.45■□□□□ 0.38
Sox4Q06831 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.45■□□□□ 0.38
Sox4Q06831 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sox4Q06831 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox4Q06831 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Sox4Q06831 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.44■□□□□ 0.38
Sox4Q06831 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sox4Q06831 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox4Q06831 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox4Q06831 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox4Q06831 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox4Q06831 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox4Q06831 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Sox4Q06831 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 Gm12382-201ENSMUST00000122005 922 ntBASIC17.43■□□□□ 0.38
Sox4Q06831 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox4Q06831 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox4Q06831 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sox4Q06831 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms