Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.7■□□□□ 0.74
Tff2Q03404 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tff2Q03404 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
Tff2Q03404 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.7■□□□□ 0.74
Tff2Q03404 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.7■□□□□ 0.74
Tff2Q03404 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.7■□□□□ 0.74
Tff2Q03404 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tff2Q03404 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tff2Q03404 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Gm7284-201ENSMUST00000131667 944 ntBASIC19.69■□□□□ 0.74
Tff2Q03404 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
Tff2Q03404 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tff2Q03404 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tff2Q03404 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tff2Q03404 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.68■□□□□ 0.74
Tff2Q03404 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tff2Q03404 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tff2Q03404 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.67■□□□□ 0.74
Tff2Q03404 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Tff2Q03404 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Tff2Q03404 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.67■□□□□ 0.74
Tff2Q03404 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tff2Q03404 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.67■□□□□ 0.74
Tff2Q03404 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Tff2Q03404 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Tff2Q03404 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tff2Q03404 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.66■□□□□ 0.74
Tff2Q03404 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tff2Q03404 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Gm7791-201ENSMUST00000219066 539 ntBASIC19.66■□□□□ 0.74
Tff2Q03404 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tff2Q03404 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.65■□□□□ 0.74
Tff2Q03404 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tff2Q03404 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Gm7638-201ENSMUST00000121348 967 ntBASIC19.65■□□□□ 0.74
Tff2Q03404 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.65■□□□□ 0.74
Tff2Q03404 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.65■□□□□ 0.74
Tff2Q03404 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tff2Q03404 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tff2Q03404 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Tff2Q03404 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tff2Q03404 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff2Q03404 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff2Q03404 Gm25016-201ENSMUST00000158399 131 ntBASIC19.64■□□□□ 0.73
Tff2Q03404 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.64■□□□□ 0.73
Tff2Q03404 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.64■□□□□ 0.73
Tff2Q03404 Gm7370-201ENSMUST00000219471 767 ntBASIC19.64■□□□□ 0.73
Tff2Q03404 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.64■□□□□ 0.73
Tff2Q03404 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.64■□□□□ 0.73
Tff2Q03404 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff2Q03404 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.64■□□□□ 0.73
Tff2Q03404 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff2Q03404 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tff2Q03404 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tff2Q03404 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tff2Q03404 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tff2Q03404 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tff2Q03404 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tff2Q03404 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.63■□□□□ 0.73
Tff2Q03404 Gm16061-201ENSMUST00000122167 857 ntBASIC19.63■□□□□ 0.73
Tff2Q03404 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms