Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IhhP97812 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IhhP97812 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.55■□□□□ 0.56
IhhP97812 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IhhP97812 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IhhP97812 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IhhP97812 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.54■□□□□ 0.56
IhhP97812 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Gm29791-202ENSMUST00000207888 369 ntBASIC18.54■□□□□ 0.56
IhhP97812 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
IhhP97812 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IhhP97812 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IhhP97812 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.54■□□□□ 0.56
IhhP97812 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IhhP97812 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
IhhP97812 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.53■□□□□ 0.56
IhhP97812 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.53■□□□□ 0.56
IhhP97812 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IhhP97812 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IhhP97812 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Gm10517-202ENSMUST00000192970 758 ntBASIC18.52■□□□□ 0.56
IhhP97812 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
IhhP97812 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IhhP97812 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IhhP97812 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.51■□□□□ 0.55
IhhP97812 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IhhP97812 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.51■□□□□ 0.55
IhhP97812 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Mir6982-201ENSMUST00000184354 68 ntBASIC18.51■□□□□ 0.55
IhhP97812 Gm37055-201ENSMUST00000191866 133 ntBASIC18.51■□□□□ 0.55
IhhP97812 Gm21814-202ENSMUST00000203277 873 ntBASIC18.51■□□□□ 0.55
IhhP97812 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IhhP97812 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
IhhP97812 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.5■□□□□ 0.55
IhhP97812 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.5■□□□□ 0.55
IhhP97812 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.5■□□□□ 0.55
IhhP97812 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IhhP97812 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
IhhP97812 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
IhhP97812 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IhhP97812 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.49■□□□□ 0.55
IhhP97812 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
IhhP97812 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IhhP97812 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms