Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.68■□□□□ 0.26
Six5P70178 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.68■□□□□ 0.26
Six5P70178 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six5P70178 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six5P70178 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Six5P70178 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Six5P70178 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six5P70178 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Six5P70178 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Gm10418-201ENSMUST00000100943 576 ntBASIC16.66■□□□□ 0.26
Six5P70178 Gm11249-201ENSMUST00000117071 859 ntBASIC16.66■□□□□ 0.26
Six5P70178 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Six5P70178 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.66■□□□□ 0.26
Six5P70178 Mir6349-201ENSMUST00000184059 97 ntBASIC16.66■□□□□ 0.26
Six5P70178 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.66■□□□□ 0.26
Six5P70178 Gm10138-203ENSMUST00000206952 366 ntBASIC16.66■□□□□ 0.26
Six5P70178 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Six5P70178 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.66■□□□□ 0.26
Six5P70178 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six5P70178 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Six5P70178 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Six5P70178 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Six5P70178 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Six5P70178 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Six5P70178 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Six5P70178 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.65■□□□□ 0.26
Six5P70178 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Six5P70178 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.65■□□□□ 0.26
Six5P70178 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six5P70178 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.64■□□□□ 0.26
Six5P70178 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Gm12527-201ENSMUST00000117967 564 ntBASIC16.64■□□□□ 0.25
Six5P70178 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Six5P70178 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six5P70178 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Six5P70178 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Six5P70178 Mir2861-201ENSMUST00000175539 82 ntBASIC16.63■□□□□ 0.25
Six5P70178 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.63■□□□□ 0.25
Six5P70178 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.63■□□□□ 0.25
Six5P70178 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six5P70178 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms