Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgb1P63158 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hmgb1P63158 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgb1P63158 Gm6211-202ENSMUST00000167849 925 ntBASIC19.58■□□□□ 0.72
Hmgb1P63158 Gm26571-201ENSMUST00000181399 666 ntBASIC19.58■□□□□ 0.72
Hmgb1P63158 Gm7291-201ENSMUST00000199147 382 ntBASIC19.58■□□□□ 0.72
Hmgb1P63158 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.58■□□□□ 0.72
Hmgb1P63158 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Hmgb1P63158 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgb1P63158 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hmgb1P63158 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.57■□□□□ 0.72
Hmgb1P63158 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.57■□□□□ 0.72
Hmgb1P63158 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.57■□□□□ 0.72
Hmgb1P63158 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgb1P63158 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.57■□□□□ 0.72
Hmgb1P63158 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Gm42569-201ENSMUST00000200539 472 ntBASIC19.56■□□□□ 0.72
Hmgb1P63158 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Idnk-204ENSMUST00000226010 1898 ntBASIC19.56■□□□□ 0.72
Hmgb1P63158 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.56■□□□□ 0.72
Hmgb1P63158 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgb1P63158 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.55■□□□□ 0.72
Hmgb1P63158 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgb1P63158 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hmgb1P63158 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmgb1P63158 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Hmgb1P63158 Gm8495-201ENSMUST00000188740 694 ntBASIC19.54■□□□□ 0.72
Hmgb1P63158 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hmgb1P63158 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hmgb1P63158 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgb1P63158 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hmgb1P63158 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.53■□□□□ 0.72
Hmgb1P63158 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
Hmgb1P63158 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.53■□□□□ 0.72
Hmgb1P63158 Gm38285-201ENSMUST00000192928 922 ntBASIC19.53■□□□□ 0.72
Hmgb1P63158 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.53■□□□□ 0.72
Hmgb1P63158 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmgb1P63158 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms