Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Ybx1P62960 Gm10517-202ENSMUST00000192970 758 ntBASIC18.3■□□□□ 0.52
Ybx1P62960 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ybx1P62960 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ybx1P62960 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.29■□□□□ 0.52
Ybx1P62960 Gm18959-201ENSMUST00000208954 655 ntBASIC18.29■□□□□ 0.52
Ybx1P62960 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.29■□□□□ 0.52
Ybx1P62960 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ybx1P62960 Gm7367-201ENSMUST00000057611 492 ntBASIC18.29■□□□□ 0.52
Ybx1P62960 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ybx1P62960 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ybx1P62960 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ybx1P62960 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ybx1P62960 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.28■□□□□ 0.52
Ybx1P62960 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.28■□□□□ 0.52
Ybx1P62960 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.28■□□□□ 0.52
Ybx1P62960 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.28■□□□□ 0.52
Ybx1P62960 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.28■□□□□ 0.52
Ybx1P62960 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ybx1P62960 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.27■□□□□ 0.52
Ybx1P62960 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.27■□□□□ 0.52
Ybx1P62960 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.27■□□□□ 0.52
Ybx1P62960 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.27■□□□□ 0.52
Ybx1P62960 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ybx1P62960 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.27■□□□□ 0.52
Ybx1P62960 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ybx1P62960 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ybx1P62960 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.26■□□□□ 0.51
Ybx1P62960 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ybx1P62960 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.26■□□□□ 0.51
Ybx1P62960 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ybx1P62960 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ybx1P62960 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.25■□□□□ 0.51
Ybx1P62960 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ybx1P62960 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.25■□□□□ 0.51
Ybx1P62960 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.25■□□□□ 0.51
Ybx1P62960 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ybx1P62960 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ybx1P62960 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ybx1P62960 Gm23634-201ENSMUST00000175071 91 ntBASIC18.24■□□□□ 0.51
Ybx1P62960 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.24■□□□□ 0.51
Ybx1P62960 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ybx1P62960 Gm18032-201ENSMUST00000222541 538 ntBASIC18.24■□□□□ 0.51
Ybx1P62960 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ybx1P62960 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ybx1P62960 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ybx1P62960 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms