Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm5P62322 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm5P62322 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm5P62322 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm5P62322 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lsm5P62322 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lsm5P62322 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm5P62322 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.89□□□□□ -0.03
Lsm5P62322 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.89□□□□□ -0.03
Lsm5P62322 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm5P62322 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lsm5P62322 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Lsm5P62322 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lsm5P62322 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lsm5P62322 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.88□□□□□ -0.03
Lsm5P62322 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lsm5P62322 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.88□□□□□ -0.03
Lsm5P62322 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm5P62322 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm5P62322 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.87□□□□□ -0.03
Lsm5P62322 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.87□□□□□ -0.03
Lsm5P62322 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lsm5P62322 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm5P62322 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm5P62322 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lsm5P62322 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.86□□□□□ -0.03
Lsm5P62322 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm5P62322 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lsm5P62322 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Lsm5P62322 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.86□□□□□ -0.03
Lsm5P62322 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm5P62322 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.85□□□□□ -0.03
Lsm5P62322 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm5P62322 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm5P62322 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms