Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm3P62311 Gm5921-201ENSMUST00000075898 882 ntBASIC16.32■□□□□ 0.2
Lsm3P62311 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsm3P62311 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm3P62311 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm3P62311 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm3P62311 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm3P62311 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.31■□□□□ 0.2
Lsm3P62311 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm3P62311 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lsm3P62311 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.3■□□□□ 0.2
Lsm3P62311 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.3■□□□□ 0.2
Lsm3P62311 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm3P62311 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Lsm3P62311 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm3P62311 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm3P62311 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lsm3P62311 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm3P62311 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lsm3P62311 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Lsm3P62311 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.28■□□□□ 0.2
Lsm3P62311 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.28■□□□□ 0.2
Lsm3P62311 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lsm3P62311 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm3P62311 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm3P62311 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.28■□□□□ 0.2
Lsm3P62311 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Lsm3P62311 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Lsm3P62311 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm3P62311 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms