Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrch1P62046 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lrch1P62046 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Gm24589-201ENSMUST00000116692 94 ntBASIC21.05■□□□□ 0.96
Lrch1P62046 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Gm43514-201ENSMUST00000198852 424 ntBASIC21.05■□□□□ 0.96
Lrch1P62046 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.05■□□□□ 0.96
Lrch1P62046 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrch1P62046 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Lrch1P62046 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lrch1P62046 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lrch1P62046 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lrch1P62046 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Lrch1P62046 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Lrch1P62046 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrch1P62046 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Lrch1P62046 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lrch1P62046 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lrch1P62046 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 Gm5867-201ENSMUST00000063197 592 ntBASIC21.03■□□□□ 0.96
Lrch1P62046 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lrch1P62046 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Lrch1P62046 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrch1P62046 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.02■□□□□ 0.96
Lrch1P62046 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Lrch1P62046 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lrch1P62046 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.02■□□□□ 0.96
Lrch1P62046 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrch1P62046 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrch1P62046 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lrch1P62046 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrch1P62046 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrch1P62046 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lrch1P62046 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lrch1P62046 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Lrch1P62046 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Gm27742-201ENSMUST00000184667 60 ntBASIC21■□□□□ 0.95
Lrch1P62046 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21■□□□□ 0.95
Lrch1P62046 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21■□□□□ 0.95
Lrch1P62046 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21■□□□□ 0.95
Lrch1P62046 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lrch1P62046 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrch1P62046 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Lrch1P62046 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.99■□□□□ 0.95
Lrch1P62046 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
Lrch1P62046 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrch1P62046 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lrch1P62046 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lrch1P62046 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.99■□□□□ 0.95
Lrch1P62046 Gm6443-201ENSMUST00000203599 874 ntBASIC20.99■□□□□ 0.95
Lrch1P62046 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.99■□□□□ 0.95
Lrch1P62046 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrch1P62046 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrch1P62046 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrch1P62046 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrch1P62046 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms