Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lmo4P61969 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lmo4P61969 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lmo4P61969 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.43□□□□□ -0.1
Lmo4P61969 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.43□□□□□ -0.1
Lmo4P61969 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Lmo4P61969 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lmo4P61969 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lmo4P61969 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lmo4P61969 Golph3-205ENSMUST00000228671 2842 ntBASIC14.42□□□□□ -0.1
Lmo4P61969 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.42□□□□□ -0.1
Lmo4P61969 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Gm29791-202ENSMUST00000207888 369 ntBASIC14.42□□□□□ -0.1
Lmo4P61969 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lmo4P61969 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.42□□□□□ -0.1
Lmo4P61969 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.42□□□□□ -0.1
Lmo4P61969 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lmo4P61969 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lmo4P61969 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.41□□□□□ -0.1
Lmo4P61969 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.41□□□□□ -0.1
Lmo4P61969 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lmo4P61969 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lmo4P61969 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lmo4P61969 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lmo4P61969 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lmo4P61969 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Gm24841-201ENSMUST00000158676 357 ntBASIC14.4□□□□□ -0.1
Lmo4P61969 Gm6659-201ENSMUST00000174752 547 ntBASIC14.4□□□□□ -0.1
Lmo4P61969 Gm2274-201ENSMUST00000184539 609 ntBASIC14.4□□□□□ -0.1
Lmo4P61969 Gm45058-201ENSMUST00000205810 766 ntBASIC14.4□□□□□ -0.1
Lmo4P61969 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lmo4P61969 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lmo4P61969 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lmo4P61969 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.4□□□□□ -0.1
Lmo4P61969 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lmo4P61969 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Lmo4P61969 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lmo4P61969 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lmo4P61969 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lmo4P61969 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lmo4P61969 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.39□□□□□ -0.11
Lmo4P61969 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lmo4P61969 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.39□□□□□ -0.11
Lmo4P61969 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms