Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.68■□□□□ 0.1
Sec61a1P61620 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.68■□□□□ 0.1
Sec61a1P61620 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.68■□□□□ 0.1
Sec61a1P61620 Gm6420-201ENSMUST00000193885 723 ntBASIC15.68■□□□□ 0.1
Sec61a1P61620 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sec61a1P61620 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Sec61a1P61620 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sec61a1P61620 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Sec61a1P61620 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.67■□□□□ 0.1
Sec61a1P61620 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a1P61620 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sec61a1P61620 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a1P61620 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sec61a1P61620 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Gm13534-201ENSMUST00000121169 513 ntBASIC15.66■□□□□ 0.1
Sec61a1P61620 Nespas-201ENSMUST00000143738 1083 ntBASIC15.66■□□□□ 0.1
Sec61a1P61620 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sec61a1P61620 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Gm10602-201ENSMUST00000098239 609 ntBASIC15.66■□□□□ 0.1
Sec61a1P61620 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.66■□□□□ 0.1
Sec61a1P61620 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sec61a1P61620 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sec61a1P61620 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Sec61a1P61620 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.65■□□□□ 0.1
Sec61a1P61620 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sec61a1P61620 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sec61a1P61620 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sec61a1P61620 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.64■□□□□ 0.09
Sec61a1P61620 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sec61a1P61620 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.64■□□□□ 0.09
Sec61a1P61620 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sec61a1P61620 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sec61a1P61620 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sec61a1P61620 Gm12933-201ENSMUST00000120203 872 ntBASIC15.63■□□□□ 0.09
Sec61a1P61620 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sec61a1P61620 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.63■□□□□ 0.09
Sec61a1P61620 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms