Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh5P55284 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Cdh5P55284 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh5P55284 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdh5P55284 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdh5P55284 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Cdh5P55284 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh5P55284 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdh5P55284 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh5P55284 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh5P55284 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.33■□□□□ 0.36
Cdh5P55284 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cdh5P55284 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Cdh5P55284 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh5P55284 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh5P55284 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdh5P55284 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cdh5P55284 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.32■□□□□ 0.36
Cdh5P55284 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdh5P55284 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.32■□□□□ 0.36
Cdh5P55284 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdh5P55284 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh5P55284 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdh5P55284 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdh5P55284 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdh5P55284 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Gm7290-201ENSMUST00000104990 617 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Gm12918-201ENSMUST00000120234 636 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Gm15710-201ENSMUST00000121821 636 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh5P55284 Gm5075-201ENSMUST00000196916 622 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.31■□□□□ 0.36
Cdh5P55284 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdh5P55284 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh5P55284 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh5P55284 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.3■□□□□ 0.36
Cdh5P55284 Gm13148-201ENSMUST00000118892 745 ntBASIC17.3■□□□□ 0.36
Cdh5P55284 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.3■□□□□ 0.36
Cdh5P55284 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.3■□□□□ 0.36
Cdh5P55284 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.3■□□□□ 0.36
Cdh5P55284 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh5P55284 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cdh5P55284 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdh5P55284 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdh5P55284 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.29■□□□□ 0.36
Cdh5P55284 Gm5408-201ENSMUST00000197998 747 ntBASIC17.29■□□□□ 0.36
Cdh5P55284 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdh5P55284 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdh5P55284 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh5P55284 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms