Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdx1P52946 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.62■□□□□ 0.41
Pdx1P52946 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pdx1P52946 Gm13158-201ENSMUST00000122007 736 ntBASIC17.62■□□□□ 0.41
Pdx1P52946 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.62■□□□□ 0.41
Pdx1P52946 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.62■□□□□ 0.41
Pdx1P52946 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pdx1P52946 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdx1P52946 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pdx1P52946 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.61■□□□□ 0.41
Pdx1P52946 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.61■□□□□ 0.41
Pdx1P52946 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Pdx1P52946 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.61■□□□□ 0.41
Pdx1P52946 Mir2861-201ENSMUST00000175539 82 ntBASIC17.61■□□□□ 0.41
Pdx1P52946 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.61■□□□□ 0.41
Pdx1P52946 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.61■□□□□ 0.41
Pdx1P52946 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdx1P52946 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdx1P52946 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Gm10138-203ENSMUST00000206952 366 ntBASIC17.6■□□□□ 0.41
Pdx1P52946 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.6■□□□□ 0.41
Pdx1P52946 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pdx1P52946 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdx1P52946 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdx1P52946 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdx1P52946 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.59■□□□□ 0.41
Pdx1P52946 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pdx1P52946 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.59■□□□□ 0.41
Pdx1P52946 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pdx1P52946 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pdx1P52946 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pdx1P52946 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pdx1P52946 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdx1P52946 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdx1P52946 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdx1P52946 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Pdx1P52946 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Pdx1P52946 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Pdx1P52946 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.58■□□□□ 0.41
Pdx1P52946 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdx1P52946 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Pdx1P52946 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Gm15375-201ENSMUST00000119510 849 ntBASIC17.58■□□□□ 0.4
Pdx1P52946 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pdx1P52946 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.58■□□□□ 0.4
Pdx1P52946 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.58■□□□□ 0.4
Pdx1P52946 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdx1P52946 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.58■□□□□ 0.4
Pdx1P52946 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pdx1P52946 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdx1P52946 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms