Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atoh1P48985 Gm11355-201ENSMUST00000121120 306 ntBASIC20.21■□□□□ 0.83
Atoh1P48985 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.21■□□□□ 0.83
Atoh1P48985 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atoh1P48985 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.21■□□□□ 0.83
Atoh1P48985 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atoh1P48985 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Atoh1P48985 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.2■□□□□ 0.82
Atoh1P48985 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atoh1P48985 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atoh1P48985 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atoh1P48985 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atoh1P48985 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Atoh1P48985 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atoh1P48985 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atoh1P48985 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Atoh1P48985 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atoh1P48985 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.18■□□□□ 0.82
Atoh1P48985 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Atoh1P48985 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
Atoh1P48985 Gm13401-201ENSMUST00000117074 291 ntBASIC20.18■□□□□ 0.82
Atoh1P48985 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.18■□□□□ 0.82
Atoh1P48985 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.18■□□□□ 0.82
Atoh1P48985 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atoh1P48985 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Atoh1P48985 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Atoh1P48985 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Atoh1P48985 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Atoh1P48985 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.17■□□□□ 0.82
Atoh1P48985 Gm10418-201ENSMUST00000100943 576 ntBASIC20.17■□□□□ 0.82
Atoh1P48985 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Atoh1P48985 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Atoh1P48985 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.17■□□□□ 0.82
Atoh1P48985 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Atoh1P48985 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.17■□□□□ 0.82
Atoh1P48985 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atoh1P48985 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.16■□□□□ 0.82
Atoh1P48985 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Atoh1P48985 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.16■□□□□ 0.82
Atoh1P48985 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Atoh1P48985 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Atoh1P48985 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atoh1P48985 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Atoh1P48985 Gm11950-201ENSMUST00000121615 838 ntBASIC20.15■□□□□ 0.82
Atoh1P48985 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Gm18958-201ENSMUST00000174258 762 ntBASIC20.15■□□□□ 0.82
Atoh1P48985 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.15■□□□□ 0.82
Atoh1P48985 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Atoh1P48985 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Atoh1P48985 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Atoh1P48985 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atoh1P48985 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Atoh1P48985 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Atoh1P48985 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Atoh1P48985 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Mir3081-201ENSMUST00000175305 84 ntBASIC20.14■□□□□ 0.81
Atoh1P48985 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Atoh1P48985 Gm9731-201ENSMUST00000209480 747 ntBASIC20.14■□□□□ 0.81
Atoh1P48985 Il3ra-202ENSMUST00000223589 738 ntBASIC20.14■□□□□ 0.81
Atoh1P48985 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atoh1P48985 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atoh1P48985 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atoh1P48985 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atoh1P48985 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atoh1P48985 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms