Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh2P43247 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Msh2P43247 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.37■□□□□ 0.53
Msh2P43247 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Msh2P43247 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh2P43247 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh2P43247 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Msh2P43247 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh2P43247 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.36■□□□□ 0.53
Msh2P43247 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.36■□□□□ 0.53
Msh2P43247 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.36■□□□□ 0.53
Msh2P43247 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh2P43247 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh2P43247 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Tgds-204ENSMUST00000228543 1594 ntBASIC18.35■□□□□ 0.53
Msh2P43247 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.35■□□□□ 0.53
Msh2P43247 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.35■□□□□ 0.53
Msh2P43247 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.35■□□□□ 0.53
Msh2P43247 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh2P43247 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh2P43247 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Msh2P43247 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Msh2P43247 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
Msh2P43247 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.34■□□□□ 0.53
Msh2P43247 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.34■□□□□ 0.53
Msh2P43247 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msh2P43247 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh2P43247 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msh2P43247 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Msh2P43247 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh2P43247 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.33■□□□□ 0.53
Msh2P43247 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh2P43247 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Msh2P43247 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Msh2P43247 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Msh2P43247 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Msh2P43247 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Msh2P43247 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Msh2P43247 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.32■□□□□ 0.52
Msh2P43247 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
Msh2P43247 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Gm6365-201ENSMUST00000054711 744 ntBASIC18.32■□□□□ 0.52
Msh2P43247 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.32■□□□□ 0.52
Msh2P43247 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.32■□□□□ 0.52
Msh2P43247 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msh2P43247 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Msh2P43247 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.31■□□□□ 0.52
Msh2P43247 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Msh2P43247 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh2P43247 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Msh2P43247 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms