Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Cdx2P43241 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.94■□□□□ 0.3
Cdx2P43241 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cdx2P43241 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdx2P43241 Gm17661-201ENSMUST00000170317 270 ntBASIC16.94■□□□□ 0.3
Cdx2P43241 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.94■□□□□ 0.3
Cdx2P43241 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.94■□□□□ 0.3
Cdx2P43241 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cdx2P43241 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdx2P43241 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdx2P43241 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdx2P43241 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdx2P43241 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdx2P43241 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cdx2P43241 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cdx2P43241 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdx2P43241 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Gm13474-201ENSMUST00000122466 815 ntBASIC16.92■□□□□ 0.3
Cdx2P43241 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Gm24841-201ENSMUST00000158676 357 ntBASIC16.92■□□□□ 0.3
Cdx2P43241 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cdx2P43241 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.92■□□□□ 0.3
Cdx2P43241 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdx2P43241 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdx2P43241 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdx2P43241 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdx2P43241 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Cdx2P43241 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.91■□□□□ 0.3
Cdx2P43241 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdx2P43241 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.91■□□□□ 0.3
Cdx2P43241 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.91■□□□□ 0.3
Cdx2P43241 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdx2P43241 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Cdx2P43241 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.9■□□□□ 0.3
Cdx2P43241 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdx2P43241 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdx2P43241 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdx2P43241 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cdx2P43241 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cdx2P43241 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdx2P43241 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Gm13401-201ENSMUST00000117074 291 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdx2P43241 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Gm27389-201ENSMUST00000183622 195 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 Gm7370-201ENSMUST00000219471 767 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 Gm21559-201ENSMUST00000220638 855 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdx2P43241 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdx2P43241 Gm8587-201ENSMUST00000076538 843 ntBASIC16.89■□□□□ 0.29
Cdx2P43241 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdx2P43241 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms