Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcam1P29533 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcam1P29533 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.59■□□□□ 0.89
Vcam1P29533 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcam1P29533 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcam1P29533 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcam1P29533 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Vcam1P29533 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.58■□□□□ 0.89
Vcam1P29533 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcam1P29533 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcam1P29533 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vcam1P29533 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vcam1P29533 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Vcam1P29533 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vcam1P29533 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.57■□□□□ 0.88
Vcam1P29533 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcam1P29533 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcam1P29533 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcam1P29533 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.57■□□□□ 0.88
Vcam1P29533 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcam1P29533 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcam1P29533 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Vcam1P29533 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.56■□□□□ 0.88
Vcam1P29533 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.56■□□□□ 0.88
Vcam1P29533 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.56■□□□□ 0.88
Vcam1P29533 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Vcam1P29533 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcam1P29533 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vcam1P29533 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Gm7638-201ENSMUST00000121348 967 ntBASIC20.55■□□□□ 0.88
Vcam1P29533 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.55■□□□□ 0.88
Vcam1P29533 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.55■□□□□ 0.88
Vcam1P29533 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.55■□□□□ 0.88
Vcam1P29533 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.55■□□□□ 0.88
Vcam1P29533 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.55■□□□□ 0.88
Vcam1P29533 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.55■□□□□ 0.88
Vcam1P29533 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcam1P29533 Fst-202ENSMUST00000223640 2612 ntBASIC20.55■□□□□ 0.88
Vcam1P29533 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vcam1P29533 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.54■□□□□ 0.88
Vcam1P29533 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.54■□□□□ 0.88
Vcam1P29533 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vcam1P29533 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcam1P29533 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.53■□□□□ 0.88
Vcam1P29533 Gm2274-201ENSMUST00000184539 609 ntBASIC20.53■□□□□ 0.88
Vcam1P29533 Gm7791-201ENSMUST00000219066 539 ntBASIC20.53■□□□□ 0.88
Vcam1P29533 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.53■□□□□ 0.88
Vcam1P29533 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Vcam1P29533 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vcam1P29533 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcam1P29533 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcam1P29533 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcam1P29533 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcam1P29533 Mir5130-201ENSMUST00000175160 84 ntBASIC20.52■□□□□ 0.88
Vcam1P29533 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vcam1P29533 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms