Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Usp53P15975 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Usp53P15975 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp53P15975 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp53P15975 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp53P15975 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Usp53P15975 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Usp53P15975 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp53P15975 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.61■□□□□ 0.89
Usp53P15975 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.61■□□□□ 0.89
Usp53P15975 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp53P15975 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usp53P15975 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.61■□□□□ 0.89
Usp53P15975 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp53P15975 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Gm13401-201ENSMUST00000117074 291 ntBASIC20.6■□□□□ 0.89
Usp53P15975 Gm10517-202ENSMUST00000192970 758 ntBASIC20.6■□□□□ 0.89
Usp53P15975 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.6■□□□□ 0.89
Usp53P15975 Gm21814-202ENSMUST00000203277 873 ntBASIC20.6■□□□□ 0.89
Usp53P15975 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.6■□□□□ 0.89
Usp53P15975 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp53P15975 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.59■□□□□ 0.89
Usp53P15975 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Usp53P15975 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.59■□□□□ 0.89
Usp53P15975 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp53P15975 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp53P15975 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.58■□□□□ 0.89
Usp53P15975 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Usp53P15975 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp53P15975 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp53P15975 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.58■□□□□ 0.89
Usp53P15975 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Usp53P15975 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.58■□□□□ 0.89
Usp53P15975 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp53P15975 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp53P15975 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Gm12085-201ENSMUST00000119263 940 ntBASIC20.57■□□□□ 0.88
Usp53P15975 Gm11643-201ENSMUST00000119578 864 ntBASIC20.57■□□□□ 0.88
Usp53P15975 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.57■□□□□ 0.88
Usp53P15975 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp53P15975 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp53P15975 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms