Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Mir2861-201ENSMUST00000175539 82 ntBASIC17.06■□□□□ 0.32
Cntn1P12960 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.06■□□□□ 0.32
Cntn1P12960 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.06■□□□□ 0.32
Cntn1P12960 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Cntn1P12960 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.06■□□□□ 0.32
Cntn1P12960 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cntn1P12960 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.05■□□□□ 0.32
Cntn1P12960 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.05■□□□□ 0.32
Cntn1P12960 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.05■□□□□ 0.32
Cntn1P12960 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cntn1P12960 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cntn1P12960 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.05■□□□□ 0.32
Cntn1P12960 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cntn1P12960 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cntn1P12960 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.05■□□□□ 0.32
Cntn1P12960 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cntn1P12960 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cntn1P12960 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cntn1P12960 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Tgds-204ENSMUST00000228543 1594 ntBASIC17.04■□□□□ 0.32
Cntn1P12960 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cntn1P12960 Gm12382-201ENSMUST00000122005 922 ntBASIC17.04■□□□□ 0.32
Cntn1P12960 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.04■□□□□ 0.32
Cntn1P12960 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.04■□□□□ 0.32
Cntn1P12960 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.04■□□□□ 0.32
Cntn1P12960 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cntn1P12960 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.03■□□□□ 0.32
Cntn1P12960 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cntn1P12960 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cntn1P12960 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cntn1P12960 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cntn1P12960 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.03■□□□□ 0.32
Cntn1P12960 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cntn1P12960 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.02■□□□□ 0.32
Cntn1P12960 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cntn1P12960 Mir7071-201ENSMUST00000184847 69 ntBASIC17.02■□□□□ 0.32
Cntn1P12960 Gm37055-201ENSMUST00000191866 133 ntBASIC17.02■□□□□ 0.32
Cntn1P12960 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cntn1P12960 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms