Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm29791-202ENSMUST00000207888 369 ntBASIC15.48■□□□□ 0.07
PtcraP0C6B2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.48■□□□□ 0.07
PtcraP0C6B2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PtcraP0C6B2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.47■□□□□ 0.07
PtcraP0C6B2 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.47■□□□□ 0.07
PtcraP0C6B2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PtcraP0C6B2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Mtag2-201ENSMUST00000058665 714 ntBASIC15.46■□□□□ 0.07
PtcraP0C6B2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PtcraP0C6B2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.46■□□□□ 0.06
PtcraP0C6B2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PtcraP0C6B2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.46■□□□□ 0.06
PtcraP0C6B2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Gm27275-201ENSMUST00000184318 272 ntBASIC15.45■□□□□ 0.06
PtcraP0C6B2 Gm37856-201ENSMUST00000191634 999 ntBASIC15.45■□□□□ 0.06
PtcraP0C6B2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.45■□□□□ 0.06
PtcraP0C6B2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PtcraP0C6B2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Idnk-204ENSMUST00000226010 1898 ntBASIC15.44■□□□□ 0.06
PtcraP0C6B2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Trmt13-210ENSMUST00000198454 880 ntBASIC15.44■□□□□ 0.06
PtcraP0C6B2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PtcraP0C6B2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PtcraP0C6B2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PtcraP0C6B2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms