Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2aP08775 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2aP08775 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2aP08775 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Polr2aP08775 Il3ra-202ENSMUST00000223589 738 ntBASIC20.42■□□□□ 0.86
Polr2aP08775 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Polr2aP08775 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Polr2aP08775 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
Polr2aP08775 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
Polr2aP08775 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.41■□□□□ 0.86
Polr2aP08775 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Polr2aP08775 Gm6443-201ENSMUST00000203599 874 ntBASIC20.41■□□□□ 0.86
Polr2aP08775 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.41■□□□□ 0.86
Polr2aP08775 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Polr2aP08775 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.4■□□□□ 0.86
Polr2aP08775 Gm25925-201ENSMUST00000158314 306 ntBASIC20.4■□□□□ 0.86
Polr2aP08775 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Polr2aP08775 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Polr2aP08775 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.39■□□□□ 0.86
Polr2aP08775 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Polr2aP08775 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.39■□□□□ 0.86
Polr2aP08775 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr2aP08775 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Polr2aP08775 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.39■□□□□ 0.85
Polr2aP08775 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
Polr2aP08775 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Polr2aP08775 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Polr2aP08775 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Polr2aP08775 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.39■□□□□ 0.85
Polr2aP08775 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Polr2aP08775 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.38■□□□□ 0.85
Polr2aP08775 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Polr2aP08775 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Polr2aP08775 Actl10-202ENSMUST00000226583 1501 ntBASIC20.38■□□□□ 0.85
Polr2aP08775 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Polr2aP08775 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Polr2aP08775 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Gm27459-201ENSMUST00000184860 107 ntBASIC20.37■□□□□ 0.85
Polr2aP08775 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Mir3081-201ENSMUST00000175305 84 ntBASIC20.37■□□□□ 0.85
Polr2aP08775 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Polr2aP08775 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.36■□□□□ 0.85
Polr2aP08775 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.36■□□□□ 0.85
Polr2aP08775 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2aP08775 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.36■□□□□ 0.85
Polr2aP08775 Birc2-201ENSMUST00000054878 378 ntBASIC20.36■□□□□ 0.85
Polr2aP08775 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2aP08775 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Polr2aP08775 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2aP08775 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Polr2aP08775 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Polr2aP08775 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.35■□□□□ 0.85
Polr2aP08775 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.35■□□□□ 0.85
Polr2aP08775 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Polr2aP08775 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.35■□□□□ 0.85
Polr2aP08775 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Polr2aP08775 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Polr2aP08775 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Polr2aP08775 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.35■□□□□ 0.85
Polr2aP08775 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Polr2aP08775 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Polr2aP08775 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2aP08775 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.34■□□□□ 0.85
Polr2aP08775 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Polr2aP08775 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms